jpdbi

jpdbi - Display and optionaly manipulate DCM4CHE Database entries.

jpdbi [options] [<LastName> [<FirstName> [<Birthdate>]]]

jpdbi will query DCM4CHE DB - via jdbc - so you will have access to the DCM4CHE data from command line and even if JBOSS ist not running.

If configured it will also allow updates/changes to the data. e.g. one can change the ISSUER on the PATIENT level both in the database and the DICOM Database BLOB.

jpdbi will display the date beginning at the PATIENT level down to FILES/FILESYSTEM level.

Help and Version

• -v|--version
  display version information. More v's display more information.

• -h|--help
  display extended help.

• --jdbcurlhelp
  display information to the jdbc connection Url.

Database Link

• -U|--url <jdbcUrl>
  jdbcURL for the destination database to connect to.

• --db <alias>
  JDBC-connect-url-alias as defined in properties-file.

Search Options

The first three optional command line arguments are defined as Firstname, Lastname and Birthdate. Those three can be combined with any other search option. Searching without any search criteria is not a good idea - specialy for large archives - so it is deactivated. If you really want to display all paties, use a corresponding wildcard.

SQL-Wildcards are supported on most fields. Use % for a multi-character wildcard and _ for a single character wildcard.

• -s|--studyiuid <studyiuid>
  study-IUID to search for.

• -S|--seriesiuid <studyiuid>
  series-IUID to search for.

• --issuer <issuer>
  patient issuer to search for.

• --patid [<issuer>:]<patid>
  (issuer and) patient-ID to search for.

• -d|--date <date>|<n>
  if study date is give as "YYYY-MM-DD" - this date is searched for - if a number from 0 to 999 is supplied, studies from the last <n> days is search for. You can also use "today" and "yesterday" as a date string.

• -m|--modaliy <modality>
  modality to search for.

• -q|--query <statement>
  extended query statement. (See corresponding section.)

Display Options

• -F
  include fieldnames in output. Those names are only for orientation - and are not related to the DB columns nor to the dicom tags.

• --aet
  include AE-Titles (source-aet, retreive-aet and external retreive-aet) in output.

• --pks
  include DCM4CHE DB-primary keys in output.

Display Level Options

Default level to be displayed is PATIENT level - one can choose the desired level to display - the chosen level and all levels above will be included in the output.

• --study-level
  display patient and study

• --series-level
  display patient, study and series

• --instance-level
  display patient, study, series and instances

• --path [--fs]
  display patient, study, series, instances and object-path. Optionaly include filesystem group and PK.

• --ignorenonempty
  if selected - patients missing studies (series or instances) are not displayed

Output Options

• -O|--out <file> [-z|--gzip]
  output is redirected to (gezipped) <file>

• -E|--err <file>
  error/debug (stderr) is redirected to <file>

• --debug
  debug output on stderr